Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015830921.1_cds_XP_016504325.1_17781
CDS Infomation

[gene=LOC107822308] [db_xref=GeneID:107822308] [protein=phospholipase A1-Ibeta2, chloroplastic-like] [protein_id=XP_016504325.1] [location=10550..12187] [gbkey=CDS]
Sequence

ATGCAGGTGGCAGCGGCAACTAATGTTCATTTTTTTCAGGCACGTCGATCCAGTTTCAAG
TACTGTAATGGATCATCTCCATTAAACCCTATACCTAGAGCTACTGTTGTAAATGTATTA
AAAACAGTAGCAACACCACCAACTTCTACAACAGAGATGACAAAAAAACATCTTTCAAAT
CTTGAAATGCTTTTACAAAAGAAATCTCAGCCACATCCAATGGATTCAGCAGAGCCAATT
ATTCAAGAAACAAAACAGAGGAAAACAGGGGAAAACAGAGGAAGGAATATGTTAGAAGGG
CTAAATTTGGCAAGAATTTGGCCAGAAATGAAAGCAGCTGAAGAATATTCTCCTAGGCAT
TTGGTTAAATTACACAGGATGTTATCATCAAAATCAATGGAATATTCTCCTAGAAATAAT
CTTGGGAGTAGGTGGAGAGAGTACCACGGTTGCAAAGATTGGTTAGAACTTATTGATCCA
TTGGATGAGAATCTCCGGCGAGAGTTAGTCCGATATGGTGAGTTTATTCAAGCAGCTTAC
CATTGTTTTCACTCCGACCCCGCCACGTCAGATAAAGAAAATCCTGACGTGGCGAGAAAC
GTGTCGTTACCTGATAGGTCTTATAAGGTGACTAAGAGCTTGTATGCCACGTCATCCGTT
GGCCTGCCTAAGTGGGTGGATGATGTGGCACCGGATCTTGGGTGGATGACCCAAAGGTCC
AGTTGGATCGGGTATGTCGCCGTGTGTGACGACAAAGCCGAGATCCAACGGATGGGAAGG
AGGGATATTGTCATCGCGTTACGTGGTACTGCCACGTGTCTAGAATGGGGCGAAAATTTT
CGCGACGTGCTAGTTCAAATGCCAGGAGAAAATGATTCAGTTGAAGGACAACCAAAAGTA
GAATGTGGGTTTTTGAGCTTATACCAAACAGGTGGAAATAAAATTCCAAGCTTAGCTGAA
TCTGTGGTGAATGAAGTGAAAAGACTCATTGAAATGTACAAAGGTGAGAGTCTAAGTATA
ACAGTAACAGGACATAGTCTTGGTGCTGCTTTAGCTTTATTAGTTGCAGATGATATTAGT
ACATGTACACCAGATTCACCACCAGTTGCTGTTTTTACATTTGGAGGTCCTAGGGTAGGC
AACAAAGGCTTTGCCAATCGACTCGAATCGAAAAATGTTAAGGTCTTACGTATCGTGAAC
AAACAAGATGTGATTACTAAAGTTCCAGGAATGTTTGTGAGCGAAGCGCTTGACAAAAAA
CTAAGGGAAAAAGGAGCTGCAGGGGTGTTAAATTTGCTTGACAATAGTATGCCATGGGCA
TATTCACATGTTGGTACTGAATTAAGAGTTGACACAACGAAGTCTCCGTTTTTAAAACCA
GATGCAGATGTCGCATGTTGTCATGATTTGGAAGCATATTTGCATTTGGTGGATGGATAT
TTGGGATCAAATGAATCATTTAGACCAAATGCAAAGAGAAGCCTTGTTAAGTTGTTGACT
GAACAAAGGACTAATATCAAAAAATTGTACAATAGTAAGGGAAAAGATTTGAGTAGTCTT
AATCTTAATAGAGAATTTAATTTTCCTAGACCTAGTTGTTTGCCTAGTCCTAGTGTCTTG
CCTAGTCCTTCAGCTTGA

Peptide Sequence

PEP ID

XP_016504325.1
PEP Infomation

PREDICTED: phospholipase A1-Ibeta2, chloroplastic-like [Nicotiana tabacum]
Sequence

MQVAAATNVHFFQARRSSFKYCNGSSPLNPIPRATVVNVLKTVATPPTSTTEMTKKHLSN
LEMLLQKKSQPHPMDSAEPIIQETKQRKTGENRGRNMLEGLNLARIWPEMKAAEEYSPRH
LVKLHRMLSSKSMEYSPRNNLGSRWREYHGCKDWLELIDPLDENLRRELVRYGEFIQAAY
HCFHSDPATSDKENPDVARNVSLPDRSYKVTKSLYATSSVGLPKWVDDVAPDLGWMTQRS
SWIGYVAVCDDKAEIQRMGRRDIVIALRGTATCLEWGENFRDVLVQMPGENDSVEGQPKV
ECGFLSLYQTGGNKIPSLAESVVNEVKRLIEMYKGESLSITVTGHSLGAALALLVADDIS
TCTPDSPPVAVFTFGGPRVGNKGFANRLESKNVKVLRIVNKQDVITKVPGMFVSEALDKK
LREKGAAGVLNLLDNSMPWAYSHVGTELRVDTTKSPFLKPDADVACCHDLEAYLHLVDGY
LGSNESFRPNAKRSLVKLLTEQRTNIKKLYNSKGKDLSSLNLNREFNFPRPSCLPSPSVL
PSPSA

Transcript Sequence

Gene sequence data has not been registered.